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Show Me the Genes
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By this point in the unit, students have learned all the necessary information and conceptualized a design for how an optical biosensor could be used to detect a target strand of DNA associated with a cancer-causing gene as their solution to the unit's challenge question. Now student groups act as engineers again, using a poster format to communicate and prove the validity of the design. Successful posters include a description of refraction, explanations of refraction in a thin film, and the factors that can alter the interference pattern of a thin film. The posters culminate with an explanation of what is expected to be seen in a biosensing device of this type if it were coupled to a target molecule, proven with a specific example and illustrated with drawings and diagrams throughout. All the poster elements combine to prove the accuracy and viability of this method of gene detection. Together with its associated lesson, this activity functions as part of the summative assessment for this unit.

Author:
Caleb Swartz
VU Bioengineering RET Program,
Sophisticated Survival Skills of Simple Microorganisms, Spring 2008
Conditional Remix & Share Permitted
CC BY-NC-SA
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In this course, we will discuss the microbial physiology and genetics of stress responses in aquatic ecosystems, astrobiology, bacterial pathogenesis and other environments. We will learn about classical and novel methods utilized by researchers to uncover bacterial mechanisms induced under both general and environment-specific stresses. Finally, we will compare and contrast models for bacterial stress responses to gain an understanding of distinct mechanisms of survival and of why there are differences among bacterial genera.

Subject:
Biology
Genetics
Life Science
Material Type:
Full Course
Textbook
Author:
Dolberry, Adrienne
Date Added:
01/01/2008
Special Topics: Genetics, Neurobiology, and Pathophysiology of Psychiatric Disorders, Fall 2008
Conditional Remix & Share Permitted
CC BY-NC-SA
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" An opportunity for graduate study of advanced subjects in Brain and Cognitive Sciences not included in other subject listings. The key topics covered in this course are Bipolar Disorder, Psychosis, Schizophrenia, Genetics of Psychiatric Disorder, DISC1, Ca++ Signaling, Neurogenesis and Depression, Lithium and GSK3 Hypothesis, Behavioral Assays, CREB in Addiction and Depressive Behaviors, The GABA System-I, The GABA System-II, The Glutamate Hypothesis of Schizophrenia, The Dopamine Pathway and DARPP32."

Subject:
Biology
Genetics
Life Science
Material Type:
Full Course
Textbook
Author:
Scolnick, Edward
Tsai, Li-Huei
Date Added:
01/01/2008
Studying Evolution with Digital Organisms
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Students observe natural selection in action and investigate the underlying mechanism, including random mutation and differential fitness based on environmental characteristics. They do this through use of the free AVIDA-ED digital evolution software application.

Author:
Bio-Inspired Technology and Systems (BITS) RET,
Louise Mead
Robert Pennock
Wendy Johnson
Survival of the Fittest: Competing Evolved & Engineered Digital Organisms
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Students engineer and evolve digital organisms with the challenge to produce organisms with the highest fitness values in a particular environment. They do this through use of the free Avida-ED digital evolution software application. The resulting organisms compete against each other in the same environment and students learn the benefits of applying the principles of natural selection to solve engineering design problems.

Author:
Jeff Farell
Bio-Inspired Technology and Systems (BITS) RET,
Wendy Johnson
Tissue Specific Gene Expression
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How is it that all cells in our body have the same genes, yet cells in different tissues express different genes? A basic notion in biology that most high school students fail to conceptualize is the fact that all cells in the animal or human body contain the same DNA, yet different cells in different tissues express, on the one hand, a set of common genes, and on the other, express another set of genes that vary depending on the type of tissue and the stage of development. In this video lesson, the student will be reminded that genes in a cell/tissue are expressed when certain conditions in the nucleus are met. Interestingly, the system utilized by the cell to ensure tissue specific gene expression is rather simple. Among other factors - all discussed fully in the lesson - the cells make use of a tiny scaffold known as the “Nuclear Matrix or Nucleo-Skeleton”. This video lesson spans 20 minutes and provides 5 exercises for students to work out in groups and in consultation with their classroom teacher. The entire duration of the video demonstration and exercises should take about 45-50 minutes, or equivalent to one classroom session. There are no supplies needed for students’ participation in the provided exercises. They will only need their notebooks and pens. However, the teacher may wish to emulate the demonstrations used in the video lesson by the presenter and in this case simple material can be used as those used in the video. These include play dough, pencils, rubber bands (to construct the nuclear matrix model), a tennis ball and 2-3 Meters worth of shoe laces. The students should be aware of basic information about DNA folding in the nucleus, DNA replication, gene transcription, translation and protein synthesis.

Author:
Rabih Talhouk, Elia El-Habre
To the Bitter End: A Case Study Examining the Genetics of PTC Sensitivity
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This interrupted case dramatizes the discovery of a Mendelian trait in humans, namely the variation in the ability to taste the chemical phenylthiocarbamide (PTC). By examining data and questions related to this trait, students will draw connections between Mendel's principles of inheritance and variation at the DNA level by learning about the phenotypic differences due to the single nucleotide polymorphisms (SNPs) in a major gene influencing the ability to taste PTC. Students will review Mendelian inheritance, human pedigrees, genetic markers such as single nucleotide polymorphisms, and gene mutations. If PTC paper is used and student phenotypes collected, this case can be expanded to include a population genetics component on the Hardy-Weinberg Model. The case was developed for a sophomore-level course in genetics.

Author:
R. Deborah Overath
Using DNA to Identify People
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it would be ideal if students already have learned that DNA is the genetic material, and that DNA is made up of As, Ts, Gs, and Cs. It also would help if students already know that each human has two versions of every piece of DNA in their genome, one from mom and one from dad. The lesson will take about one class period, with roughly 30 minutes of footage and 30 minutes of activities.

Author:
Megan E. Rokop
What Do Genes Do?
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This unit explores how information contained in DNA is used, explaining the flow of information from DNA to RNA to protein. Also introduced are the concepts of transcription (as occurs between DNA and RNA) and translation.

What Is the Genome Made Of?
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Genomes are composed of DNA, and a knowledge of the structure of DNA is essential to understand how it can function as hereditary material. DNA is remarkable, breathtakingly simple in its structure yet capable of directing all the living processes in a cell, the production of new cells and the development of a fertilized egg to an individual adult. DNA has three key properties: it is relatively stable; its structure suggests an obvious way in which the molecule can be duplicated, or replicated; and it carries a store of vital information that is used in the cell to produce proteins. The first two properties of DNA are analysed in this unit.

What's Dominant?
Read the Fine Print
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In a class discussion format, the teacher presents background information about basic human genetics. The number of chromosomes in both body cells and egg and sperm cells is covered, as well as the concept of dominant and recessive alleles. Students determine whether or not they possess the dominant allele for the tongue-rolling gene as an example.

Subject:
Applied Science
Engineering
Genetics
Life Science
Material Type:
Activity/Lab
Lesson Plan
Author:
Engineering K-Ph.D. Program,
Mary R. Hebrank (Project and Lesson/Activity Consultant), Duke University
Date Added:
09/18/2014
Who Robbed the Bank?
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Students use DNA profiling to determine who robbed a bank. After they learn how the FBI's Combined DNA Index System (CODIS) is used to match crime scene DNA with tissue sample DNA, students use CODIS principles and sample DNA fragments to determine which of three suspects matches evidence obtain at a crime location. They communicate their results as if they were biomedical engineers reporting to a police crime scene investigation.

Author:
Malinda Schaefer Zarske
Integrated Teaching and Learning Program,
Frank Burkholder
Denise W. Carlson
You Can’t Always Get What You Want: A Lesson in Human Evolution
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This lesson introduces students to the concepts of evolution, specifically the evolution of humans. So often our students assume that humans are well adapted to our environments because we are in control of our evolutionary destiny. The goal is to change these types of misconceptions and get our students to link the concepts learned in their DNA, protein synthesis, and genetics units to their understanding of evolution. Students will also discover that humans are still evolving and learn about the traits that are more recent adaptations to our environment. The lesson is designed to take two one-hour class periods to complete. The activities will allow students to draw connections between environmental pressures and selected traits, both through data analysis and modeling. Most activities can be done without any special materials, although the Modeling Natural Selection activity needs either a tri-colored pasta, or tricolored beans, to be completed effectively.

Author:
Julie Boehm